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Cluster: Rep_556_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_556_c_41 Rep_556_c_41_3 7802 9007 - GH88
CAZyme Rep_556_c_41 Rep_556_c_41_4 9015 10949 - PL33_1
TC Rep_556_c_41 Rep_556_c_41_5 11605 14811 + 1.B.14.6.1
TC Rep_556_c_41 Rep_556_c_41_6 14846 16561 + 8.A.46.1.3
TC Rep_556_c_41 Rep_556_c_41_7 16660 18411 - 8.A.46.1.3
TC Rep_556_c_41 Rep_556_c_41_8 18425 21751 - 1.B.14.6.1
CAZyme Rep_556_c_41 Rep_556_c_41_9 22513 24549 - GH2
Gene ID: Rep_556_c_41_3
Type: CAZyme
Location: 7802 - 9007 (-)
Gene ID: Rep_556_c_41_4
Type: CAZyme
Location: 9015 - 10949 (-)
Gene ID: Rep_556_c_41_5
Type: TC
Location: 11605 - 14811 (+)
Gene ID: Rep_556_c_41_6
Type: TC
Location: 14846 - 16561 (+)
Gene ID: Rep_556_c_41_7
Type: TC
Location: 16660 - 18411 (-)
Gene ID: Rep_556_c_41_8
Type: TC
Location: 18425 - 21751 (-)
Gene ID: Rep_556_c_41_9
Type: CAZyme
Location: 22513 - 24549 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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