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Cluster: Rep_556_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_556_c_29 Rep_556_c_29_28 33989 35086 + 3.D.7.2.3
TC Rep_556_c_29 Rep_556_c_29_29 35099 36820 + 3.D.7.2.3
TC Rep_556_c_29 Rep_556_c_29_30 36832 37572 + 3.D.7.2.3
peptidase Rep_556_c_29 Rep_556_c_29_31 37696 38142 + A31.UPW
pfam Rep_556_c_29 Rep_556_c_29_32 38274 39785 - FGGY_N | FGGY_C
CAZyme Rep_556_c_29 Rep_556_c_29_33 39916 42261 - GT51
TC Rep_556_c_29 Rep_556_c_29_34 42297 43238 - 2.A.98.1.4
Gene ID: Rep_556_c_29_28
Type: TC
Location: 33989 - 35086 (+)
Gene ID: Rep_556_c_29_29
Type: TC
Location: 35099 - 36820 (+)
Gene ID: Rep_556_c_29_30
Type: TC
Location: 36832 - 37572 (+)
Gene ID: Rep_556_c_29_31
Type: peptidase
Location: 37696 - 38142 (+)
Gene ID: Rep_556_c_29_32
Type: pfam
Location: 38274 - 39785 (-)
Gene ID: Rep_556_c_29_33
Type: CAZyme
Location: 39916 - 42261 (-)
Gene ID: Rep_556_c_29_34
Type: TC
Location: 42297 - 43238 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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