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Cluster: Rep_556_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_556_c_14 Rep_556_c_14_2 1350 2378 + 2.A.7.6.1
pfam Rep_556_c_14 Rep_556_c_14_3 2726 3526 + Aldolase_II
CAZyme Rep_556_c_14 Rep_556_c_14_4 3610 5370 + GH78
CAZyme Rep_556_c_14 Rep_556_c_14_5 5394 7595 + CBM67 | GH78
pfam Rep_556_c_14 Rep_556_c_14_6 7704 8711 + Endonuclease_NS
TC Rep_556_c_14 Rep_556_c_14_7 8861 9928 + 8.A.1.6.2
TC Rep_556_c_14 Rep_556_c_14_8 9940 12981 + 2.A.6.2.37
Gene ID: Rep_556_c_14_2
Type: TC
Location: 1350 - 2378 (+)
Gene ID: Rep_556_c_14_3
Type: pfam
Location: 2726 - 3526 (+)
Gene ID: Rep_556_c_14_4
Type: CAZyme
Location: 3610 - 5370 (+)
Gene ID: Rep_556_c_14_5
Type: CAZyme
Location: 5394 - 7595 (+)
Gene ID: Rep_556_c_14_6
Type: pfam
Location: 7704 - 8711 (+)
Gene ID: Rep_556_c_14_7
Type: TC
Location: 8861 - 9928 (+)
Gene ID: Rep_556_c_14_8
Type: TC
Location: 9940 - 12981 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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