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Cluster: Rep_556_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_556_c_9 Rep_556_c_9_8 10937 13201 + GT20
CAZyme Rep_556_c_9 Rep_556_c_9_9 13198 14988 + GH15
CAZyme Rep_556_c_9 Rep_556_c_9_10 15009 16772 - GH13_31
TC Rep_556_c_9 Rep_556_c_9_11 17058 18674 + 3.A.1.120.6
pfam Rep_556_c_9 Rep_556_c_9_12 18752 19747 - DUF2268
TC Rep_556_c_9 Rep_556_c_9_13 19957 21279 + 2.A.66.1.28
Gene ID: Rep_556_c_9_8
Type: CAZyme
Location: 10937 - 13201 (+)
Gene ID: Rep_556_c_9_9
Type: CAZyme
Location: 13198 - 14988 (+)
Gene ID: Rep_556_c_9_10
Type: CAZyme
Location: 15009 - 16772 (-)
Gene ID: Rep_556_c_9_11
Type: TC
Location: 17058 - 18674 (+)
Gene ID: Rep_556_c_9_12
Type: pfam
Location: 18752 - 19747 (-)
Gene ID: Rep_556_c_9_13
Type: TC
Location: 19957 - 21279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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