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Cluster: Rep_556_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_556_c_8 Rep_556_c_8_70 80770 82704 + GH133
CAZyme Rep_556_c_8 Rep_556_c_8_71 82717 83979 + GT4
CAZyme Rep_556_c_8 Rep_556_c_8_72 84010 85311 + GH57
pfam Rep_556_c_8 Rep_556_c_8_73 85393 86766 - DUF4270
CAZyme Rep_556_c_8 Rep_556_c_8_74 86778 87647 - GT5
pfam Rep_556_c_8 Rep_556_c_8_75 87696 88538 + Pantoate_ligase
pfam Rep_556_c_8 Rep_556_c_8_76 88565 88915 + Asp_decarbox
TC Rep_556_c_8 Rep_556_c_8_77 89029 90351 + 2.A.66.1.45
TC Rep_556_c_8 Rep_556_c_8_78 90431 91756 + 3.A.5.1.1
Gene ID: Rep_556_c_8_70
Type: CAZyme
Location: 80770 - 82704 (+)
Gene ID: Rep_556_c_8_71
Type: CAZyme
Location: 82717 - 83979 (+)
Gene ID: Rep_556_c_8_72
Type: CAZyme
Location: 84010 - 85311 (+)
Gene ID: Rep_556_c_8_73
Type: pfam
Location: 85393 - 86766 (-)
Gene ID: Rep_556_c_8_74
Type: CAZyme
Location: 86778 - 87647 (-)
Gene ID: Rep_556_c_8_75
Type: pfam
Location: 87696 - 88538 (+)
Gene ID: Rep_556_c_8_76
Type: pfam
Location: 88565 - 88915 (+)
Gene ID: Rep_556_c_8_77
Type: TC
Location: 89029 - 90351 (+)
Gene ID: Rep_556_c_8_78
Type: TC
Location: 90431 - 91756 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_556_c_8_77 vegetarian > omnivore 1.35656 0.00079

🧭 Explore Read Mapping of CGC

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