dbCAN HGM

Cluster: Rep_556_CGC21

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_556_c_6	Rep_556_c_6_54	56858	58510	+	GH156
peptidase	Rep_556_c_6	Rep_556_c_6_55	58758	60368	+	C69.UPW
TF	Rep_556_c_6	Rep_556_c_6_56	60396	61304	-	HTH_AraC \| HTH_AraC
TC	Rep_556_c_6	Rep_556_c_6_57	61492	64686	+	1.B.14.6.1
TC	Rep_556_c_6	Rep_556_c_6_58	64713	66656	+	8.A.46.1.6
pfam	Rep_556_c_6	Rep_556_c_6_59	66789	68651	+	DUF6057
pfam	Rep_556_c_6	Rep_556_c_6_60	68675	70144	+	PD40 \| PD40 \| PD40
CAZyme	Rep_556_c_6	Rep_556_c_6_61	70256	71737	+	GH28
CAZyme	Rep_556_c_6	Rep_556_c_6_62	71790	72542	+	GH28
CAZyme	Rep_556_c_6	Rep_556_c_6_63	72557	75439	+	GH106
CAZyme	Rep_556_c_6	Rep_556_c_6_64	75489	76931	+	GH28

Gene ID: Rep_556_c_6_54
Type: CAZyme
Location: 56858 - 58510 (+)

Gene ID: Rep_556_c_6_55
Type: peptidase
Location: 58758 - 60368 (+)

Gene ID: Rep_556_c_6_56
Type: TF
Location: 60396 - 61304 (-)

Gene ID: Rep_556_c_6_57
Type: TC
Location: 61492 - 64686 (+)

Gene ID: Rep_556_c_6_58
Type: TC
Location: 64713 - 66656 (+)

Gene ID: Rep_556_c_6_59
Type: pfam
Location: 66789 - 68651 (+)

Gene ID: Rep_556_c_6_60
Type: pfam
Location: 68675 - 70144 (+)

Gene ID: Rep_556_c_6_61
Type: CAZyme
Location: 70256 - 71737 (+)

Gene ID: Rep_556_c_6_62
Type: CAZyme
Location: 71790 - 72542 (+)

Gene ID: Rep_556_c_6_63
Type: CAZyme
Location: 72557 - 75439 (+)

Gene ID: Rep_556_c_6_64
Type: CAZyme
Location: 75489 - 76931 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_556_c_6_54	vegetarian > omnivore	1.08708	0.00079
Rep_556_c_6_55	vegetarian > omnivore	1.06006	0.00079
Rep_556_c_6_61	vegetarian > omnivore	1.36152	0.00079
Rep_556_c_6_62	vegetarian > omnivore	1.48947	0.00079
Rep_556_c_6_63	vegetarian > omnivore	1.15162	0.00079