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Cluster: Rep_556_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_556_c_4 Rep_556_c_4_51 65289 66953 - 8.A.46.2.1
TC Rep_556_c_4 Rep_556_c_4_52 66977 70267 - 1.B.14.6.2
pfam Rep_556_c_4 Rep_556_c_4_53 70843 71397 + Flavodoxin_2 | FMN_red
pfam Rep_556_c_4 Rep_556_c_4_54 71735 73171 + GFO_IDH_MocA | GFO_IDH_MocA_C2
CAZyme Rep_556_c_4 Rep_556_c_4_55 73349 76519 + GH92
TC Rep_556_c_4 Rep_556_c_4_56 76645 79956 - 9.A.25.1.1
TC Rep_556_c_4 Rep_556_c_4_57 80056 81687 - 8.A.46.1.1
TC Rep_556_c_4 Rep_556_c_4_58 81700 85032 - 1.B.14.6.1
Gene ID: Rep_556_c_4_51
Type: TC
Location: 65289 - 66953 (-)
Gene ID: Rep_556_c_4_52
Type: TC
Location: 66977 - 70267 (-)
Gene ID: Rep_556_c_4_53
Type: pfam
Location: 70843 - 71397 (+)
Gene ID: Rep_556_c_4_54
Type: pfam
Location: 71735 - 73171 (+)
Gene ID: Rep_556_c_4_55
Type: CAZyme
Location: 73349 - 76519 (+)
Gene ID: Rep_556_c_4_56
Type: TC
Location: 76645 - 79956 (-)
Gene ID: Rep_556_c_4_57
Type: TC
Location: 80056 - 81687 (-)
Gene ID: Rep_556_c_4_58
Type: TC
Location: 81700 - 85032 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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