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Cluster: Rep_553_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_553_c_11 Rep_553_c_11_68 72497 75754 - 2.A.6.3.11
pfam Rep_553_c_11 Rep_553_c_11_69 75777 77258 - OEP | OEP
TC Rep_553_c_11 Rep_553_c_11_70 77255 80350 - 2.A.6.3.6
TC Rep_553_c_11 Rep_553_c_11_71 80377 81495 - 2.A.6.2.32
pfam Rep_553_c_11 Rep_553_c_11_72 81521 83374 - Wzy_C
peptidase Rep_553_c_11 Rep_553_c_11_73 83388 84260 - S26.UPA
CAZyme Rep_553_c_11 Rep_553_c_11_74 84269 86221 - CBM62
Gene ID: Rep_553_c_11_68
Type: TC
Location: 72497 - 75754 (-)
Gene ID: Rep_553_c_11_69
Type: pfam
Location: 75777 - 77258 (-)
Gene ID: Rep_553_c_11_70
Type: TC
Location: 77255 - 80350 (-)
Gene ID: Rep_553_c_11_71
Type: TC
Location: 80377 - 81495 (-)
Gene ID: Rep_553_c_11_72
Type: pfam
Location: 81521 - 83374 (-)
Gene ID: Rep_553_c_11_73
Type: peptidase
Location: 83388 - 84260 (-)
Gene ID: Rep_553_c_11_74
Type: CAZyme
Location: 84269 - 86221 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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