Cluster: Rep_553_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_553
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_553_c_10 | Rep_553_c_10_68 | 86300 | 87304 | + | GH43_17 |
| NULL(UNKNOWN) | Rep_553_c_10 | Rep_553_c_10_69 | 87446 | 87757 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_553_c_10 | Rep_553_c_10_70 | 87968 | 88120 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_553_c_10 | Rep_553_c_10_71 | 88275 | 91040 | + | CBM67 | GH78 |
| STP | Rep_553_c_10 | Rep_553_c_10_72 | 91167 | 94313 | + | TPR_2 |
| TC | Rep_553_c_10 | Rep_553_c_10_73 | 94722 | 96221 | - | 2.A.36.6.11 |
Gene ID: Rep_553_c_10_68
Type: CAZyme
Location: 86300 - 87304 (+)
Type: CAZyme
Location: 86300 - 87304 (+)
Gene ID: Rep_553_c_10_69
Type:
Location: 87446 - 87757 (-)
Type:
Location: 87446 - 87757 (-)
Gene ID: Rep_553_c_10_70
Type:
Location: 87968 - 88120 (+)
Type:
Location: 87968 - 88120 (+)
Gene ID: Rep_553_c_10_71
Type: CAZyme
Location: 88275 - 91040 (+)
Type: CAZyme
Location: 88275 - 91040 (+)
Gene ID: Rep_553_c_10_72
Type: STP
Location: 91167 - 94313 (+)
Type: STP
Location: 91167 - 94313 (+)
Gene ID: Rep_553_c_10_73
Type: TC
Location: 94722 - 96221 (-)
Type: TC
Location: 94722 - 96221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides sp900541965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.