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Cluster: Rep_551_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_551_c_12 Rep_551_c_12_25 25330 27693 - 1.B.14.3.6
CAZyme Rep_551_c_12 Rep_551_c_12_26 28208 30058 + CBM50 | CBM50
pfam Rep_551_c_12 Rep_551_c_12_27 30049 30723 + OMP_b-brl_2
pfam Rep_551_c_12 Rep_551_c_12_28 31000 31830 + DUF2807
TC Rep_551_c_12 Rep_551_c_12_29 31909 32733 + 1.A.30.1.3
TC Rep_551_c_12 Rep_551_c_12_30 32878 34143 + 2.A.6.1.5
TC Rep_551_c_12 Rep_551_c_12_31 34162 35262 + 2.A.6.1.4
TC Rep_551_c_12 Rep_551_c_12_32 35271 38396 + 2.A.6.1.17
TF Rep_551_c_12 Rep_551_c_12_33 38466 39143 + Trans_reg_C
STP Rep_551_c_12 Rep_551_c_12_34 39140 40321 + HATPase_c | HisKA
TC Rep_551_c_12 Rep_551_c_12_35 40318 41511 - 2.A.1.7.1
Gene ID: Rep_551_c_12_25
Type: TC
Location: 25330 - 27693 (-)
Gene ID: Rep_551_c_12_26
Type: CAZyme
Location: 28208 - 30058 (+)
Gene ID: Rep_551_c_12_27
Type: pfam
Location: 30049 - 30723 (+)
Gene ID: Rep_551_c_12_28
Type: pfam
Location: 31000 - 31830 (+)
Gene ID: Rep_551_c_12_29
Type: TC
Location: 31909 - 32733 (+)
Gene ID: Rep_551_c_12_30
Type: TC
Location: 32878 - 34143 (+)
Gene ID: Rep_551_c_12_31
Type: TC
Location: 34162 - 35262 (+)
Gene ID: Rep_551_c_12_32
Type: TC
Location: 35271 - 38396 (+)
Gene ID: Rep_551_c_12_33
Type: TF
Location: 38466 - 39143 (+)
Gene ID: Rep_551_c_12_34
Type: STP
Location: 39140 - 40321 (+)
Gene ID: Rep_551_c_12_35
Type: TC
Location: 40318 - 41511 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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