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Cluster: Rep_551_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_551_c_62 Rep_551_c_62_3 1477 3291 - GH2
TC Rep_551_c_62 Rep_551_c_62_4 3423 5273 - 3.A.16.1.2
NULL(UNKNOWN) Rep_551_c_62 Rep_551_c_62_5 5444 5677 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_551_c_62 Rep_551_c_62_6 5694 8585 - GH38
TC Rep_551_c_62 Rep_551_c_62_7 8637 9791 - 2.A.1.7.17
CAZyme Rep_551_c_62 Rep_551_c_62_8 9796 12150 - GH92
sulfatase Rep_551_c_62 Rep_551_c_62_9 12182 13249 - S1_7
NULL(UNKNOWN) Rep_551_c_62 Rep_551_c_62_10 13292 15034 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_551_c_62 Rep_551_c_62_11 15044 16348 - GH78
Gene ID: Rep_551_c_62_3
Type: CAZyme
Location: 1477 - 3291 (-)
Gene ID: Rep_551_c_62_4
Type: TC
Location: 3423 - 5273 (-)
Gene ID: Rep_551_c_62_5
Type:
Location: 5444 - 5677 (-)
Gene ID: Rep_551_c_62_6
Type: CAZyme
Location: 5694 - 8585 (-)
Gene ID: Rep_551_c_62_7
Type: TC
Location: 8637 - 9791 (-)
Gene ID: Rep_551_c_62_8
Type: CAZyme
Location: 9796 - 12150 (-)
Gene ID: Rep_551_c_62_9
Type: sulfatase
Location: 12182 - 13249 (-)
Gene ID: Rep_551_c_62_10
Type:
Location: 13292 - 15034 (-)
Gene ID: Rep_551_c_62_11
Type: CAZyme
Location: 15044 - 16348 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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