Cluster: Rep_551_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_551
- CGC Family ID: CGCFAM_03227
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_551_c_50 | Rep_551_c_50_9 | 9092 | 10018 | + | 1.B.18.3.3 |
| pfam | Rep_551_c_50 | Rep_551_c_50_10 | 10030 | 11643 | + | GNVR |
| pfam | Rep_551_c_50 | Rep_551_c_50_11 | 11649 | 12254 | + | Hexapep | Hexapep_2 |
| CAZyme | Rep_551_c_50 | Rep_551_c_50_12 | 12244 | 13284 | + | GT4 |
| CAZyme | Rep_551_c_50 | Rep_551_c_50_13 | 13290 | 14009 | + | GT26 |
Gene ID: Rep_551_c_50_9
Type: TC
Location: 9092 - 10018 (+)
Type: TC
Location: 9092 - 10018 (+)
Gene ID: Rep_551_c_50_10
Type: pfam
Location: 10030 - 11643 (+)
Type: pfam
Location: 10030 - 11643 (+)
Gene ID: Rep_551_c_50_11
Type: pfam
Location: 11649 - 12254 (+)
Type: pfam
Location: 11649 - 12254 (+)
Gene ID: Rep_551_c_50_12
Type: CAZyme
Location: 12244 - 13284 (+)
Type: CAZyme
Location: 12244 - 13284 (+)
Gene ID: Rep_551_c_50_13
Type: CAZyme
Location: 13290 - 14009 (+)
Type: CAZyme
Location: 13290 - 14009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.