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Cluster: Rep_551_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_551_c_47 Rep_551_c_47_6 4769 7120 - GH20
STP Rep_551_c_47 Rep_551_c_47_7 7198 8478 - Aminotran_1_2
sulfatase Rep_551_c_47 Rep_551_c_47_8 8539 9174 - S1_4
TC Rep_551_c_47 Rep_551_c_47_9 9213 10871 - 3.A.1.120.6
pfam Rep_551_c_47 Rep_551_c_47_10 10992 11966 - PMI_typeI_cat | MPI_cupin_dom
CAZyme Rep_551_c_47 Rep_551_c_47_11 11988 14009 - GH13_8
TC Rep_551_c_47 Rep_551_c_47_12 14211 16535 + 2.A.37.4.2
TC Rep_551_c_47 Rep_551_c_47_13 16647 18278 + 2.A.81.1.2
TC Rep_551_c_47 Rep_551_c_47_14 18655 21582 + 3.A.1.204.9
Gene ID: Rep_551_c_47_6
Type: CAZyme
Location: 4769 - 7120 (-)
Gene ID: Rep_551_c_47_7
Type: STP
Location: 7198 - 8478 (-)
Gene ID: Rep_551_c_47_8
Type: sulfatase
Location: 8539 - 9174 (-)
Gene ID: Rep_551_c_47_9
Type: TC
Location: 9213 - 10871 (-)
Gene ID: Rep_551_c_47_10
Type: pfam
Location: 10992 - 11966 (-)
Gene ID: Rep_551_c_47_11
Type: CAZyme
Location: 11988 - 14009 (-)
Gene ID: Rep_551_c_47_12
Type: TC
Location: 14211 - 16535 (+)
Gene ID: Rep_551_c_47_13
Type: TC
Location: 16647 - 18278 (+)
Gene ID: Rep_551_c_47_14
Type: TC
Location: 18655 - 21582 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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