Cluster: Rep_551_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_551
- CGC Family ID: CGCFAM_09222
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_551_c_28 | Rep_551_c_28_2 | 1034 | 1783 | - | 1.B.42.1.2 |
| TC | Rep_551_c_28 | Rep_551_c_28_3 | 1899 | 2645 | + | 3.A.1.27.1 |
| TC | Rep_551_c_28 | Rep_551_c_28_4 | 2648 | 3418 | + | 3.A.1.27.4 |
| CAZyme | Rep_551_c_28 | Rep_551_c_28_5 | 3446 | 5425 | + | GH33 |
Gene ID: Rep_551_c_28_2
Type: TC
Location: 1034 - 1783 (-)
Type: TC
Location: 1034 - 1783 (-)
Gene ID: Rep_551_c_28_3
Type: TC
Location: 1899 - 2645 (+)
Type: TC
Location: 1899 - 2645 (+)
Gene ID: Rep_551_c_28_4
Type: TC
Location: 2648 - 3418 (+)
Type: TC
Location: 2648 - 3418 (+)
Gene ID: Rep_551_c_28_5
Type: CAZyme
Location: 3446 - 5425 (+)
Type: CAZyme
Location: 3446 - 5425 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_551_c_28_2 | vegan > omnivore | 1.83407 | 0.02691 |