Cluster: Rep_551_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_551
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_551_c_19 | Rep_551_c_19_7 | 8633 | 11842 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | Rep_551_c_19 | Rep_551_c_19_8 | 12191 | 12346 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_551_c_19 | Rep_551_c_19_9 | 12369 | 15254 | - | GH2 |
| TC | Rep_551_c_19 | Rep_551_c_19_10 | 15426 | 16733 | + | 2.A.35.1.5 |
| TF | Rep_551_c_19 | Rep_551_c_19_11 | 16721 | 18055 | - | HTH_8 |
| CAZyme | Rep_551_c_19 | Rep_551_c_19_12 | 18207 | 18977 | - | GH16_3 |
| CAZyme | Rep_551_c_19 | Rep_551_c_19_13 | 19466 | 23083 | + | GH2 |
Gene ID: Rep_551_c_19_7
Type: TC
Location: 8633 - 11842 (-)
Type: TC
Location: 8633 - 11842 (-)
Gene ID: Rep_551_c_19_8
Type:
Location: 12191 - 12346 (+)
Type:
Location: 12191 - 12346 (+)
Gene ID: Rep_551_c_19_9
Type: CAZyme
Location: 12369 - 15254 (-)
Type: CAZyme
Location: 12369 - 15254 (-)
Gene ID: Rep_551_c_19_10
Type: TC
Location: 15426 - 16733 (+)
Type: TC
Location: 15426 - 16733 (+)
Gene ID: Rep_551_c_19_11
Type: TF
Location: 16721 - 18055 (-)
Type: TF
Location: 16721 - 18055 (-)
Gene ID: Rep_551_c_19_12
Type: CAZyme
Location: 18207 - 18977 (-)
Type: CAZyme
Location: 18207 - 18977 (-)
Gene ID: Rep_551_c_19_13
Type: CAZyme
Location: 19466 - 23083 (+)
Type: CAZyme
Location: 19466 - 23083 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.