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Cluster: Rep_551_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_551_c_15 Rep_551_c_15_20 24430 25455 + GH109
TC Rep_551_c_15 Rep_551_c_15_21 25461 26897 + 2.A.66.2.6
NULL(UNKNOWN) Rep_551_c_15 Rep_551_c_15_22 26904 28022 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_551_c_15 Rep_551_c_15_23 28031 29143 + GT4
NULL(UNKNOWN) Rep_551_c_15 Rep_551_c_15_24 29213 29662 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_551_c_15 Rep_551_c_15_25 29673 30530 + GT2
CAZyme Rep_551_c_15 Rep_551_c_15_26 30535 31473 + GT23
CAZyme Rep_551_c_15 Rep_551_c_15_27 31498 32760 + GT4
CAZyme Rep_551_c_15 Rep_551_c_15_28 32757 33518 + GT2
TC Rep_551_c_15 Rep_551_c_15_29 33540 36056 + 9.B.144.1.4
CAZyme Rep_551_c_15 Rep_551_c_15_30 36379 37377 - GT2
CAZyme Rep_551_c_15 Rep_551_c_15_31 37381 38121 - GT2
Gene ID: Rep_551_c_15_20
Type: CAZyme
Location: 24430 - 25455 (+)
Gene ID: Rep_551_c_15_21
Type: TC
Location: 25461 - 26897 (+)
Gene ID: Rep_551_c_15_22
Type:
Location: 26904 - 28022 (+)
Gene ID: Rep_551_c_15_23
Type: CAZyme
Location: 28031 - 29143 (+)
Gene ID: Rep_551_c_15_24
Type:
Location: 29213 - 29662 (+)
Gene ID: Rep_551_c_15_25
Type: CAZyme
Location: 29673 - 30530 (+)
Gene ID: Rep_551_c_15_26
Type: CAZyme
Location: 30535 - 31473 (+)
Gene ID: Rep_551_c_15_27
Type: CAZyme
Location: 31498 - 32760 (+)
Gene ID: Rep_551_c_15_28
Type: CAZyme
Location: 32757 - 33518 (+)
Gene ID: Rep_551_c_15_29
Type: TC
Location: 33540 - 36056 (+)
Gene ID: Rep_551_c_15_30
Type: CAZyme
Location: 36379 - 37377 (-)
Gene ID: Rep_551_c_15_31
Type: CAZyme
Location: 37381 - 38121 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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