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Cluster: Rep_551_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_551_c_15 Rep_551_c_15_10 11688 12818 + GT4
CAZyme Rep_551_c_15 Rep_551_c_15_11 12873 13580 + GT32
CAZyme Rep_551_c_15 Rep_551_c_15_12 13583 14317 + GT2
pfam Rep_551_c_15 Rep_551_c_15_13 14350 15093 - Kdo
CAZyme Rep_551_c_15 Rep_551_c_15_14 15090 16115 - GT9
pfam Rep_551_c_15 Rep_551_c_15_15 16118 16726 - DUF4254
TC Rep_551_c_15 Rep_551_c_15_16 16777 17976 - 2.A.1.46.5
Gene ID: Rep_551_c_15_10
Type: CAZyme
Location: 11688 - 12818 (+)
Gene ID: Rep_551_c_15_11
Type: CAZyme
Location: 12873 - 13580 (+)
Gene ID: Rep_551_c_15_12
Type: CAZyme
Location: 13583 - 14317 (+)
Gene ID: Rep_551_c_15_13
Type: pfam
Location: 14350 - 15093 (-)
Gene ID: Rep_551_c_15_14
Type: CAZyme
Location: 15090 - 16115 (-)
Gene ID: Rep_551_c_15_15
Type: pfam
Location: 16118 - 16726 (-)
Gene ID: Rep_551_c_15_16
Type: TC
Location: 16777 - 17976 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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