Cluster: Rep_549_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_549
- CGC Family ID: CGCFAM_09230
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_549_c_0 | Rep_549_c_0_654 | 748359 | 749126 | + | 2.A.79.2.1 |
| pfam | Rep_549_c_0 | Rep_549_c_0_655 | 749123 | 749626 | + | ThrE_2 |
| pfam | Rep_549_c_0 | Rep_549_c_0_656 | 749630 | 750361 | + | DUF6064 |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_657 | 750441 | 752480 | - | GH127 |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_658 | 752498 | 754357 | - | GH127 |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_659 | 754437 | 755063 | - | GH43 |
Gene ID: Rep_549_c_0_654
Type: TC
Location: 748359 - 749126 (+)
Type: TC
Location: 748359 - 749126 (+)
Gene ID: Rep_549_c_0_655
Type: pfam
Location: 749123 - 749626 (+)
Type: pfam
Location: 749123 - 749626 (+)
Gene ID: Rep_549_c_0_656
Type: pfam
Location: 749630 - 750361 (+)
Type: pfam
Location: 749630 - 750361 (+)
Gene ID: Rep_549_c_0_657
Type: CAZyme
Location: 750441 - 752480 (-)
Type: CAZyme
Location: 750441 - 752480 (-)
Gene ID: Rep_549_c_0_658
Type: CAZyme
Location: 752498 - 754357 (-)
Type: CAZyme
Location: 752498 - 754357 (-)
Gene ID: Rep_549_c_0_659
Type: CAZyme
Location: 754437 - 755063 (-)
Type: CAZyme
Location: 754437 - 755063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.