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Cluster: Rep_549_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_549_c_0 Rep_549_c_0_1546 1812096 1813151 + GT4
CAZyme Rep_549_c_0 Rep_549_c_0_1547 1813159 1814421 + GT4
CAZyme Rep_549_c_0 Rep_549_c_0_1548 1814483 1815244 + GT2
TC Rep_549_c_0 Rep_549_c_0_1549 1815346 1817862 + 9.B.144.1.4
pfam Rep_549_c_0 Rep_549_c_0_1550 1817977 1819395 - AdoHcyase_NAD | 2-Hacid_dh_C | AdoHcyase | KARI_N
TC Rep_549_c_0 Rep_549_c_0_1551 1819557 1820258 - 2.A.122.1.1
TC Rep_549_c_0 Rep_549_c_0_1552 1820265 1820606 - 1.E.14.1.15
Gene ID: Rep_549_c_0_1546
Type: CAZyme
Location: 1812096 - 1813151 (+)
Gene ID: Rep_549_c_0_1547
Type: CAZyme
Location: 1813159 - 1814421 (+)
Gene ID: Rep_549_c_0_1548
Type: CAZyme
Location: 1814483 - 1815244 (+)
Gene ID: Rep_549_c_0_1549
Type: TC
Location: 1815346 - 1817862 (+)
Gene ID: Rep_549_c_0_1550
Type: pfam
Location: 1817977 - 1819395 (-)
Gene ID: Rep_549_c_0_1551
Type: TC
Location: 1819557 - 1820258 (-)
Gene ID: Rep_549_c_0_1552
Type: TC
Location: 1820265 - 1820606 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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