Cluster: Rep_549_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_549
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_549_c_0 | Rep_549_c_0_1495 | 1746882 | 1748735 | - | GH2 |
| TC | Rep_549_c_0 | Rep_549_c_0_1496 | 1748760 | 1749956 | - | 9.B.169.1.8 |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_1497 | 1749964 | 1751772 | - | GH2 |
| sulfatase | Rep_549_c_0 | Rep_549_c_0_1498 | 1751809 | 1754358 | - | S1_4 |
| peptidase | Rep_549_c_0 | Rep_549_c_0_1499 | 1754954 | 1756174 | + | M16.UPB |
| TC | Rep_549_c_0 | Rep_549_c_0_1500 | 1756179 | 1757579 | - | 2.A.25.1.5 |
Gene ID: Rep_549_c_0_1495
Type: CAZyme
Location: 1746882 - 1748735 (-)
Type: CAZyme
Location: 1746882 - 1748735 (-)
Gene ID: Rep_549_c_0_1496
Type: TC
Location: 1748760 - 1749956 (-)
Type: TC
Location: 1748760 - 1749956 (-)
Gene ID: Rep_549_c_0_1497
Type: CAZyme
Location: 1749964 - 1751772 (-)
Type: CAZyme
Location: 1749964 - 1751772 (-)
Gene ID: Rep_549_c_0_1498
Type: sulfatase
Location: 1751809 - 1754358 (-)
Type: sulfatase
Location: 1751809 - 1754358 (-)
Gene ID: Rep_549_c_0_1499
Type: peptidase
Location: 1754954 - 1756174 (+)
Type: peptidase
Location: 1754954 - 1756174 (+)
Gene ID: Rep_549_c_0_1500
Type: TC
Location: 1756179 - 1757579 (-)
Type: TC
Location: 1756179 - 1757579 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.