Cluster: Rep_549_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_549
- CGC Family ID: CGCFAM_00791
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_549_c_0 | Rep_549_c_0_1363 | 1590403 | 1593207 | - | GH2 |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_1364 | 1593226 | 1595961 | - | GH2 |
| NULL(UNKNOWN) | Rep_549_c_0 | Rep_549_c_0_1365 | 1595980 | 1596444 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_549_c_0 | Rep_549_c_0_1366 | 1596293 | 1599595 | - | TPR_2 |
| TC | Rep_549_c_0 | Rep_549_c_0_1367 | 1599620 | 1600993 | - | 2.A.1.1.3 |
Gene ID: Rep_549_c_0_1363
Type: CAZyme
Location: 1590403 - 1593207 (-)
Type: CAZyme
Location: 1590403 - 1593207 (-)
Gene ID: Rep_549_c_0_1364
Type: CAZyme
Location: 1593226 - 1595961 (-)
Type: CAZyme
Location: 1593226 - 1595961 (-)
Gene ID: Rep_549_c_0_1365
Type:
Location: 1595980 - 1596444 (+)
Type:
Location: 1595980 - 1596444 (+)
Gene ID: Rep_549_c_0_1366
Type: STP
Location: 1596293 - 1599595 (-)
Type: STP
Location: 1596293 - 1599595 (-)
Gene ID: Rep_549_c_0_1367
Type: TC
Location: 1599620 - 1600993 (-)
Type: TC
Location: 1599620 - 1600993 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.