dbCAN HGM

Cluster: Rep_549_CGC21

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_549_c_0	Rep_549_c_0_1290	1499697	1501814	+	GH2
CAZyme	Rep_549_c_0	Rep_549_c_0_1291	1501824	1503806	-	CE17
CAZyme	Rep_549_c_0	Rep_549_c_0_1292	1503996	1505342	-	GH29
pfam	Rep_549_c_0	Rep_549_c_0_1293	1505426	1505839	-	Cupin_2
TF	Rep_549_c_0	Rep_549_c_0_1294	1505985	1506356	+	DUF24
CAZyme	Rep_549_c_0	Rep_549_c_0_1295	1506472	1508019	-	GH29
TF	Rep_549_c_0	Rep_549_c_0_1296	1508182	1509036	-	HTH_AraC \| HTH_AraC
pfam	Rep_549_c_0	Rep_549_c_0_1297	1509166	1509564	+	rhaM
TC	Rep_549_c_0	Rep_549_c_0_1298	1509648	1510580	+	8.A.5.1.6
pfam	Rep_549_c_0	Rep_549_c_0_1299	1510593	1511516	+	Amidohydro_2
TC	Rep_549_c_0	Rep_549_c_0_1300	1511513	1512766	+	2.A.1.7.1

Gene ID: Rep_549_c_0_1290
Type: CAZyme
Location: 1499697 - 1501814 (+)

Gene ID: Rep_549_c_0_1291
Type: CAZyme
Location: 1501824 - 1503806 (-)

Gene ID: Rep_549_c_0_1292
Type: CAZyme
Location: 1503996 - 1505342 (-)

Gene ID: Rep_549_c_0_1293
Type: pfam
Location: 1505426 - 1505839 (-)

Gene ID: Rep_549_c_0_1294
Type: TF
Location: 1505985 - 1506356 (+)

Gene ID: Rep_549_c_0_1295
Type: CAZyme
Location: 1506472 - 1508019 (-)

Gene ID: Rep_549_c_0_1296
Type: TF
Location: 1508182 - 1509036 (-)

Gene ID: Rep_549_c_0_1297
Type: pfam
Location: 1509166 - 1509564 (+)

Gene ID: Rep_549_c_0_1298
Type: TC
Location: 1509648 - 1510580 (+)

Gene ID: Rep_549_c_0_1299
Type: pfam
Location: 1510593 - 1511516 (+)

Gene ID: Rep_549_c_0_1300
Type: TC
Location: 1511513 - 1512766 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.