Cluster: Rep_549_CGC18
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_549
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_549_c_0 | Rep_549_c_0_1176 | 1347947 | 1350934 | + | 1.B.14.6.1 |
| TC | Rep_549_c_0 | Rep_549_c_0_1177 | 1350948 | 1352519 | + | 8.A.46.1.1 |
| NULL(UNKNOWN) | Rep_549_c_0 | Rep_549_c_0_1178 | 1352487 | 1352582 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_1179 | 1352698 | 1354701 | + | GH13_14 |
| TC | Rep_549_c_0 | Rep_549_c_0_1180 | 1354726 | 1356102 | + | 2.A.2.6.3 |
| CAZyme | Rep_549_c_0 | Rep_549_c_0_1181 | 1356104 | 1358779 | + | GH77 |
| pfam | Rep_549_c_0 | Rep_549_c_0_1182 | 1358884 | 1359642 | - | DUF6261 |
| pfam | Rep_549_c_0 | Rep_549_c_0_1183 | 1360058 | 1361782 | - | SusD-like | SusD-like_2 |
| TC | Rep_549_c_0 | Rep_549_c_0_1184 | 1361817 | 1365260 | - | 1.B.14.6.2 |
| TC | Rep_549_c_0 | Rep_549_c_0_1185 | 1365760 | 1369122 | + | 1.B.14.6.2 |
| TC | Rep_549_c_0 | Rep_549_c_0_1186 | 1369140 | 1370918 | + | 8.A.46.2.1 |
| NULL(UNKNOWN) | Rep_549_c_0 | Rep_549_c_0_1187 | 1371151 | 1371411 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_549_c_0 | Rep_549_c_0_1188 | 1371430 | 1373631 | + | Patatin | Omp85_2 |
| TC | Rep_549_c_0 | Rep_549_c_0_1189 | 1373639 | 1374190 | - | 2.A.51.1.6 |
| TC | Rep_549_c_0 | Rep_549_c_0_1190 | 1374237 | 1374773 | - | 2.A.51.1.6 |
| TC | Rep_549_c_0 | Rep_549_c_0_1191 | 1374773 | 1376368 | - | 9.B.174.1.1 |
Gene ID: Rep_549_c_0_1176
Type: TC
Location: 1347947 - 1350934 (+)
Type: TC
Location: 1347947 - 1350934 (+)
Gene ID: Rep_549_c_0_1177
Type: TC
Location: 1350948 - 1352519 (+)
Type: TC
Location: 1350948 - 1352519 (+)
Gene ID: Rep_549_c_0_1178
Type:
Location: 1352487 - 1352582 (-)
Type:
Location: 1352487 - 1352582 (-)
Gene ID: Rep_549_c_0_1179
Type: CAZyme
Location: 1352698 - 1354701 (+)
Type: CAZyme
Location: 1352698 - 1354701 (+)
Gene ID: Rep_549_c_0_1180
Type: TC
Location: 1354726 - 1356102 (+)
Type: TC
Location: 1354726 - 1356102 (+)
Gene ID: Rep_549_c_0_1181
Type: CAZyme
Location: 1356104 - 1358779 (+)
Type: CAZyme
Location: 1356104 - 1358779 (+)
Gene ID: Rep_549_c_0_1182
Type: pfam
Location: 1358884 - 1359642 (-)
Type: pfam
Location: 1358884 - 1359642 (-)
Gene ID: Rep_549_c_0_1183
Type: pfam
Location: 1360058 - 1361782 (-)
Type: pfam
Location: 1360058 - 1361782 (-)
Gene ID: Rep_549_c_0_1184
Type: TC
Location: 1361817 - 1365260 (-)
Type: TC
Location: 1361817 - 1365260 (-)
Gene ID: Rep_549_c_0_1185
Type: TC
Location: 1365760 - 1369122 (+)
Type: TC
Location: 1365760 - 1369122 (+)
Gene ID: Rep_549_c_0_1186
Type: TC
Location: 1369140 - 1370918 (+)
Type: TC
Location: 1369140 - 1370918 (+)
Gene ID: Rep_549_c_0_1187
Type:
Location: 1371151 - 1371411 (+)
Type:
Location: 1371151 - 1371411 (+)
Gene ID: Rep_549_c_0_1188
Type: pfam
Location: 1371430 - 1373631 (+)
Type: pfam
Location: 1371430 - 1373631 (+)
Gene ID: Rep_549_c_0_1189
Type: TC
Location: 1373639 - 1374190 (-)
Type: TC
Location: 1373639 - 1374190 (-)
Gene ID: Rep_549_c_0_1190
Type: TC
Location: 1374237 - 1374773 (-)
Type: TC
Location: 1374237 - 1374773 (-)
Gene ID: Rep_549_c_0_1191
Type: TC
Location: 1374773 - 1376368 (-)
Type: TC
Location: 1374773 - 1376368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.