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Cluster: Rep_549_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_549_c_0 Rep_549_c_0_905 1016168 1017340 - GH130_3
pfam Rep_549_c_0 Rep_549_c_0_906 1017348 1018052 - DUF3823 | DUF3823_C
TC Rep_549_c_0 Rep_549_c_0_907 1018069 1019916 - 8.A.46.1.5
TC Rep_549_c_0 Rep_549_c_0_908 1019929 1023288 - 1.B.14.6.1
STP Rep_549_c_0 Rep_549_c_0_909 1023440 1024429 - FecR
TF Rep_549_c_0 Rep_549_c_0_910 1024665 1025219 - GerE
CAZyme Rep_549_c_0 Rep_549_c_0_911 1025331 1026524 - GH130_3
CAZyme Rep_549_c_0 Rep_549_c_0_912 1026627 1028750 - GH141
Gene ID: Rep_549_c_0_905
Type: CAZyme
Location: 1016168 - 1017340 (-)
Gene ID: Rep_549_c_0_906
Type: pfam
Location: 1017348 - 1018052 (-)
Gene ID: Rep_549_c_0_907
Type: TC
Location: 1018069 - 1019916 (-)
Gene ID: Rep_549_c_0_908
Type: TC
Location: 1019929 - 1023288 (-)
Gene ID: Rep_549_c_0_909
Type: STP
Location: 1023440 - 1024429 (-)
Gene ID: Rep_549_c_0_910
Type: TF
Location: 1024665 - 1025219 (-)
Gene ID: Rep_549_c_0_911
Type: CAZyme
Location: 1025331 - 1026524 (-)
Gene ID: Rep_549_c_0_912
Type: CAZyme
Location: 1026627 - 1028750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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