Cluster: Rep_547_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_547
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_547_c_4 | Rep_547_c_4_31 | 37284 | 38801 | - | 2.A.17.1.6 |
| pfam | Rep_547_c_4 | Rep_547_c_4_32 | 38831 | 39895 | - | DUF4831 |
| CAZyme | Rep_547_c_4 | Rep_547_c_4_33 | 40266 | 42050 | + | CBM50 |
| pfam | Rep_547_c_4 | Rep_547_c_4_34 | 42084 | 42722 | + | OMP_b-brl | OMP_b-brl_2 |
| peptidase | Rep_547_c_4 | Rep_547_c_4_35 | 42874 | 43665 | - | M48.UPC |
| TC | Rep_547_c_4 | Rep_547_c_4_36 | 44031 | 46619 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | Rep_547_c_4 | Rep_547_c_4_37 | 46748 | 47074 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_547_c_4 | Rep_547_c_4_38 | 47093 | 47773 | + | 9.B.186.1.3 |
| NULL(UNKNOWN) | Rep_547_c_4 | Rep_547_c_4_39 | 48078 | 48236 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_547_c_4 | Rep_547_c_4_40 | 48461 | 49465 | + | M28.UPA |
| CAZyme | Rep_547_c_4 | Rep_547_c_4_41 | 49493 | 51796 | + | GH92 |
| CAZyme | Rep_547_c_4 | Rep_547_c_4_42 | 51868 | 54252 | - | GT51 |
Gene ID: Rep_547_c_4_31
Type: TC
Location: 37284 - 38801 (-)
Type: TC
Location: 37284 - 38801 (-)
Gene ID: Rep_547_c_4_32
Type: pfam
Location: 38831 - 39895 (-)
Type: pfam
Location: 38831 - 39895 (-)
Gene ID: Rep_547_c_4_33
Type: CAZyme
Location: 40266 - 42050 (+)
Type: CAZyme
Location: 40266 - 42050 (+)
Gene ID: Rep_547_c_4_34
Type: pfam
Location: 42084 - 42722 (+)
Type: pfam
Location: 42084 - 42722 (+)
Gene ID: Rep_547_c_4_35
Type: peptidase
Location: 42874 - 43665 (-)
Type: peptidase
Location: 42874 - 43665 (-)
Gene ID: Rep_547_c_4_36
Type: TC
Location: 44031 - 46619 (+)
Type: TC
Location: 44031 - 46619 (+)
Gene ID: Rep_547_c_4_37
Type:
Location: 46748 - 47074 (+)
Type:
Location: 46748 - 47074 (+)
Gene ID: Rep_547_c_4_38
Type: TC
Location: 47093 - 47773 (+)
Type: TC
Location: 47093 - 47773 (+)
Gene ID: Rep_547_c_4_39
Type:
Location: 48078 - 48236 (+)
Type:
Location: 48078 - 48236 (+)
Gene ID: Rep_547_c_4_40
Type: peptidase
Location: 48461 - 49465 (+)
Type: peptidase
Location: 48461 - 49465 (+)
Gene ID: Rep_547_c_4_41
Type: CAZyme
Location: 49493 - 51796 (+)
Type: CAZyme
Location: 49493 - 51796 (+)
Gene ID: Rep_547_c_4_42
Type: CAZyme
Location: 51868 - 54252 (-)
Type: CAZyme
Location: 51868 - 54252 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_547_c_4_36 | vegetarian > omnivore | 1.23845 | 0.00364 |