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Cluster: Rep_547_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_547_c_83 Rep_547_c_83_3 2431 2784 + 3.A.1.109.1
NULL(UNKNOWN) Rep_547_c_83 Rep_547_c_83_4 2787 3503 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_547_c_83 Rep_547_c_83_5 3500 3784 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_547_c_83 Rep_547_c_83_6 3762 4514 + GT4
CAZyme Rep_547_c_83 Rep_547_c_83_7 4616 5320 + GT32
STP Rep_547_c_83 Rep_547_c_83_8 5363 5602 + NTP_transf_2
CAZyme Rep_547_c_83 Rep_547_c_83_9 5612 6709 + GH76
TC Rep_547_c_83 Rep_547_c_83_10 6784 8271 + 1.B.73.2.2
Gene ID: Rep_547_c_83_3
Type: TC
Location: 2431 - 2784 (+)
Gene ID: Rep_547_c_83_4
Type:
Location: 2787 - 3503 (+)
Gene ID: Rep_547_c_83_5
Type:
Location: 3500 - 3784 (+)
Gene ID: Rep_547_c_83_6
Type: CAZyme
Location: 3762 - 4514 (+)
Gene ID: Rep_547_c_83_7
Type: CAZyme
Location: 4616 - 5320 (+)
Gene ID: Rep_547_c_83_8
Type: STP
Location: 5363 - 5602 (+)
Gene ID: Rep_547_c_83_9
Type: CAZyme
Location: 5612 - 6709 (+)
Gene ID: Rep_547_c_83_10
Type: TC
Location: 6784 - 8271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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