dbCAN Logo

Cluster: Rep_547_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_547_c_63 Rep_547_c_63_1 134 1462 - GH109
pfam Rep_547_c_63 Rep_547_c_63_2 1753 2907 - Cyt_bd_oxida_II
TC Rep_547_c_63 Rep_547_c_63_3 3026 4576 - 3.D.4.3.2
pfam Rep_547_c_63 Rep_547_c_63_4 4590 4811 - DUF4492
TC Rep_547_c_63 Rep_547_c_63_5 4915 6090 - 2.A.23.2.11
TC Rep_547_c_63 Rep_547_c_63_6 6071 7528 - 2.A.35.1.6
pfam Rep_547_c_63 Rep_547_c_63_7 7647 8342 - SIR2
CAZyme Rep_547_c_63 Rep_547_c_63_8 8393 10462 - GH29
pfam Rep_547_c_63 Rep_547_c_63_9 10495 10884 - DUF3127
pfam Rep_547_c_63 Rep_547_c_63_10 11149 14412 + TMEM260-like
CAZyme Rep_547_c_63 Rep_547_c_63_11 14520 15143 + CE4
Gene ID: Rep_547_c_63_1
Type: CAZyme
Location: 134 - 1462 (-)
Gene ID: Rep_547_c_63_2
Type: pfam
Location: 1753 - 2907 (-)
Gene ID: Rep_547_c_63_3
Type: TC
Location: 3026 - 4576 (-)
Gene ID: Rep_547_c_63_4
Type: pfam
Location: 4590 - 4811 (-)
Gene ID: Rep_547_c_63_5
Type: TC
Location: 4915 - 6090 (-)
Gene ID: Rep_547_c_63_6
Type: TC
Location: 6071 - 7528 (-)
Gene ID: Rep_547_c_63_7
Type: pfam
Location: 7647 - 8342 (-)
Gene ID: Rep_547_c_63_8
Type: CAZyme
Location: 8393 - 10462 (-)
Gene ID: Rep_547_c_63_9
Type: pfam
Location: 10495 - 10884 (-)
Gene ID: Rep_547_c_63_10
Type: pfam
Location: 11149 - 14412 (+)
Gene ID: Rep_547_c_63_11
Type: CAZyme
Location: 14520 - 15143 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List