Cluster: Rep_547_CGC36
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_547
- CGC Family ID: CGCFAM_06865
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_547_c_44 | Rep_547_c_44_12 | 14628 | 17093 | + | 3.A.3.5.18 |
| NULL(UNKNOWN) | Rep_547_c_44 | Rep_547_c_44_13 | 17365 | 18138 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_547_c_44 | Rep_547_c_44_14 | 18157 | 20181 | + | GH146 |
| CAZyme | Rep_547_c_44 | Rep_547_c_44_15 | 20289 | 21023 | - | GT2 |
| CAZyme | Rep_547_c_44 | Rep_547_c_44_16 | 21041 | 21775 | - | GT32 |
| pfam | Rep_547_c_44 | Rep_547_c_44_17 | 21843 | 22628 | - | Kdo |
| CAZyme | Rep_547_c_44 | Rep_547_c_44_18 | 22634 | 23767 | - | GT4 |
Gene ID: Rep_547_c_44_12
Type: TC
Location: 14628 - 17093 (+)
Type: TC
Location: 14628 - 17093 (+)
Gene ID: Rep_547_c_44_13
Type:
Location: 17365 - 18138 (+)
Type:
Location: 17365 - 18138 (+)
Gene ID: Rep_547_c_44_14
Type: CAZyme
Location: 18157 - 20181 (+)
Type: CAZyme
Location: 18157 - 20181 (+)
Gene ID: Rep_547_c_44_15
Type: CAZyme
Location: 20289 - 21023 (-)
Type: CAZyme
Location: 20289 - 21023 (-)
Gene ID: Rep_547_c_44_16
Type: CAZyme
Location: 21041 - 21775 (-)
Type: CAZyme
Location: 21041 - 21775 (-)
Gene ID: Rep_547_c_44_17
Type: pfam
Location: 21843 - 22628 (-)
Type: pfam
Location: 21843 - 22628 (-)
Gene ID: Rep_547_c_44_18
Type: CAZyme
Location: 22634 - 23767 (-)
Type: CAZyme
Location: 22634 - 23767 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.