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Cluster: Rep_547_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_547_c_37 Rep_547_c_37_9 8646 11198 + GH84
pfam Rep_547_c_37 Rep_547_c_37_10 11422 11901 + PgpA
pfam Rep_547_c_37 Rep_547_c_37_11 11910 12446 + GtrA_DPMS_TM
TC Rep_547_c_37 Rep_547_c_37_12 12427 13107 + 4.F.1.3.2
pfam Rep_547_c_37 Rep_547_c_37_13 13131 14054 + PAP2_3
pfam Rep_547_c_37 Rep_547_c_37_14 14112 14576 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme Rep_547_c_37 Rep_547_c_37_15 14661 15554 + GH73
Gene ID: Rep_547_c_37_9
Type: CAZyme
Location: 8646 - 11198 (+)
Gene ID: Rep_547_c_37_10
Type: pfam
Location: 11422 - 11901 (+)
Gene ID: Rep_547_c_37_11
Type: pfam
Location: 11910 - 12446 (+)
Gene ID: Rep_547_c_37_12
Type: TC
Location: 12427 - 13107 (+)
Gene ID: Rep_547_c_37_13
Type: pfam
Location: 13131 - 14054 (+)
Gene ID: Rep_547_c_37_14
Type: pfam
Location: 14112 - 14576 (-)
Gene ID: Rep_547_c_37_15
Type: CAZyme
Location: 14661 - 15554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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