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Cluster: Rep_547_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_547_c_36 Rep_547_c_36_7 7134 10421 - 1.B.14.6.1
pfam Rep_547_c_36 Rep_547_c_36_8 10603 11529 - Exo_endo_phos
CAZyme Rep_547_c_36 Rep_547_c_36_9 11619 12794 + GH171
CAZyme Rep_547_c_36 Rep_547_c_36_10 12997 14238 + GT4
NULL(UNKNOWN) Rep_547_c_36 Rep_547_c_36_11 14183 14368 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_547_c_36 Rep_547_c_36_12 14365 15333 + GT2
CAZyme Rep_547_c_36 Rep_547_c_36_13 15353 16114 + GT2
TC Rep_547_c_36 Rep_547_c_36_14 16165 18669 + 9.B.144.1.4
Gene ID: Rep_547_c_36_7
Type: TC
Location: 7134 - 10421 (-)
Gene ID: Rep_547_c_36_8
Type: pfam
Location: 10603 - 11529 (-)
Gene ID: Rep_547_c_36_9
Type: CAZyme
Location: 11619 - 12794 (+)
Gene ID: Rep_547_c_36_10
Type: CAZyme
Location: 12997 - 14238 (+)
Gene ID: Rep_547_c_36_11
Type:
Location: 14183 - 14368 (+)
Gene ID: Rep_547_c_36_12
Type: CAZyme
Location: 14365 - 15333 (+)
Gene ID: Rep_547_c_36_13
Type: CAZyme
Location: 15353 - 16114 (+)
Gene ID: Rep_547_c_36_14
Type: TC
Location: 16165 - 18669 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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