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Cluster: Rep_547_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_547_c_27 Rep_547_c_27_18 18866 20497 + GH78
pfam Rep_547_c_27 Rep_547_c_27_19 21027 25301 + DUF6383
pfam Rep_547_c_27 Rep_547_c_27_20 25642 27315 - PRK
TC Rep_547_c_27 Rep_547_c_27_21 27392 29077 + 2.A.58.2.2
pfam Rep_547_c_27 Rep_547_c_27_22 29217 30119 - Ppx-GppA
pfam Rep_547_c_27 Rep_547_c_27_23 30145 32208 - PP_kinase | PP_kinase_N | PP_kinase_C | PLDc_2 | PLDc_2 | PP_kinase_C_1
CAZyme Rep_547_c_27 Rep_547_c_27_24 32277 33443 - GT1
Gene ID: Rep_547_c_27_18
Type: CAZyme
Location: 18866 - 20497 (+)
Gene ID: Rep_547_c_27_19
Type: pfam
Location: 21027 - 25301 (+)
Gene ID: Rep_547_c_27_20
Type: pfam
Location: 25642 - 27315 (-)
Gene ID: Rep_547_c_27_21
Type: TC
Location: 27392 - 29077 (+)
Gene ID: Rep_547_c_27_22
Type: pfam
Location: 29217 - 30119 (-)
Gene ID: Rep_547_c_27_23
Type: pfam
Location: 30145 - 32208 (-)
Gene ID: Rep_547_c_27_24
Type: CAZyme
Location: 32277 - 33443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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