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Cluster: Rep_541_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_541_c_1 Rep_541_c_1_68 75481 76467 + GH109
TC Rep_541_c_1 Rep_541_c_1_69 76581 78848 - 2.A.37.1.5
STP Rep_541_c_1 Rep_541_c_1_70 79119 79535 + Glyoxalase
TC Rep_541_c_1 Rep_541_c_1_71 79660 81213 + 3.B.1.1.2
pfam Rep_541_c_1 Rep_541_c_1_72 81261 82193 + LTD | OAD_gamma
TC Rep_541_c_1 Rep_541_c_1_73 82218 82658 + 3.B.1.1.2
TC Rep_541_c_1 Rep_541_c_1_74 82660 83820 + 3.B.1.1.2
STP Rep_541_c_1 Rep_541_c_1_75 83979 85334 + TPR_1
CAZyme Rep_541_c_1 Rep_541_c_1_76 85448 87301 + GH13_46
Gene ID: Rep_541_c_1_68
Type: CAZyme
Location: 75481 - 76467 (+)
Gene ID: Rep_541_c_1_69
Type: TC
Location: 76581 - 78848 (-)
Gene ID: Rep_541_c_1_70
Type: STP
Location: 79119 - 79535 (+)
Gene ID: Rep_541_c_1_71
Type: TC
Location: 79660 - 81213 (+)
Gene ID: Rep_541_c_1_72
Type: pfam
Location: 81261 - 82193 (+)
Gene ID: Rep_541_c_1_73
Type: TC
Location: 82218 - 82658 (+)
Gene ID: Rep_541_c_1_74
Type: TC
Location: 82660 - 83820 (+)
Gene ID: Rep_541_c_1_75
Type: STP
Location: 83979 - 85334 (+)
Gene ID: Rep_541_c_1_76
Type: CAZyme
Location: 85448 - 87301 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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