Cluster: Rep_541_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_541
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_541_c_10 | Rep_541_c_10_40 | 48782 | 49972 | + | GT19 |
| pfam | Rep_541_c_10 | Rep_541_c_10_41 | 50083 | 50838 | + | NigD_N | NigD_C |
| pfam | Rep_541_c_10 | Rep_541_c_10_42 | 50945 | 51784 | - | CTP_transf_1 |
| TC | Rep_541_c_10 | Rep_541_c_10_43 | 51800 | 53905 | - | 3.A.16.1.1 |
| pfam | Rep_541_c_10 | Rep_541_c_10_44 | 53915 | 54274 | - | RsfS |
| pfam | Rep_541_c_10 | Rep_541_c_10_45 | 54787 | 56643 | - | DUF349 | DUF349 | DUF349 | DUF349 | DUF349 |
| TC | Rep_541_c_10 | Rep_541_c_10_46 | 56769 | 58115 | - | 1.A.26.1.1 |
Gene ID: Rep_541_c_10_40
Type: CAZyme
Location: 48782 - 49972 (+)
Type: CAZyme
Location: 48782 - 49972 (+)
Gene ID: Rep_541_c_10_41
Type: pfam
Location: 50083 - 50838 (+)
Type: pfam
Location: 50083 - 50838 (+)
Gene ID: Rep_541_c_10_42
Type: pfam
Location: 50945 - 51784 (-)
Type: pfam
Location: 50945 - 51784 (-)
Gene ID: Rep_541_c_10_43
Type: TC
Location: 51800 - 53905 (-)
Type: TC
Location: 51800 - 53905 (-)
Gene ID: Rep_541_c_10_44
Type: pfam
Location: 53915 - 54274 (-)
Type: pfam
Location: 53915 - 54274 (-)
Gene ID: Rep_541_c_10_45
Type: pfam
Location: 54787 - 56643 (-)
Type: pfam
Location: 54787 - 56643 (-)
Gene ID: Rep_541_c_10_46
Type: TC
Location: 56769 - 58115 (-)
Type: TC
Location: 56769 - 58115 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.