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Cluster: Rep_532_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_532_c_2 Rep_532_c_2_53 57327 59156 + 2.A.38.4.2
pfam Rep_532_c_2 Rep_532_c_2_54 59160 59849 + TrkA_N
pfam Rep_532_c_2 Rep_532_c_2_55 59856 60881 - YceG
CAZyme Rep_532_c_2 Rep_532_c_2_56 60988 62559 + GH51_1
NULL(UNKNOWN) Rep_532_c_2 Rep_532_c_2_57 62803 63798 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_532_c_2 Rep_532_c_2_58 63853 64911 + 3.A.1.7.1
TC Rep_532_c_2 Rep_532_c_2_59 64927 65784 + 3.A.1.7.1
TC Rep_532_c_2 Rep_532_c_2_60 65805 66674 + 3.A.1.7.1
TC Rep_532_c_2 Rep_532_c_2_61 66662 67432 + 3.A.1.7.2
STP Rep_532_c_2 Rep_532_c_2_62 67525 68430 - PfkB
pfam Rep_532_c_2 Rep_532_c_2_63 68673 69980 + Inos-1-P_synth | NAD_binding_5
TC Rep_532_c_2 Rep_532_c_2_64 70195 72834 + 1.B.14.6.14
Gene ID: Rep_532_c_2_53
Type: TC
Location: 57327 - 59156 (+)
Gene ID: Rep_532_c_2_54
Type: pfam
Location: 59160 - 59849 (+)
Gene ID: Rep_532_c_2_55
Type: pfam
Location: 59856 - 60881 (-)
Gene ID: Rep_532_c_2_56
Type: CAZyme
Location: 60988 - 62559 (+)
Gene ID: Rep_532_c_2_57
Type:
Location: 62803 - 63798 (+)
Gene ID: Rep_532_c_2_58
Type: TC
Location: 63853 - 64911 (+)
Gene ID: Rep_532_c_2_59
Type: TC
Location: 64927 - 65784 (+)
Gene ID: Rep_532_c_2_60
Type: TC
Location: 65805 - 66674 (+)
Gene ID: Rep_532_c_2_61
Type: TC
Location: 66662 - 67432 (+)
Gene ID: Rep_532_c_2_62
Type: STP
Location: 67525 - 68430 (-)
Gene ID: Rep_532_c_2_63
Type: pfam
Location: 68673 - 69980 (+)
Gene ID: Rep_532_c_2_64
Type: TC
Location: 70195 - 72834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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