dbCAN Logo

Cluster: Rep_532_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_532_c_2 Rep_532_c_2_25 23599 24819 - 3.A.1.122.1
TC Rep_532_c_2 Rep_532_c_2_26 24839 25585 - 3.A.1.122.2
pfam Rep_532_c_2 Rep_532_c_2_27 25598 26821 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC Rep_532_c_2 Rep_532_c_2_28 26834 28177 - 3.A.1.109.5
pfam Rep_532_c_2 Rep_532_c_2_29 28320 28538 + DUF4492
TC Rep_532_c_2 Rep_532_c_2_30 28577 30073 + 3.D.4.3.2
pfam Rep_532_c_2 Rep_532_c_2_31 30108 31259 + Cyt_bd_oxida_II
CAZyme Rep_532_c_2 Rep_532_c_2_32 31557 34055 + CBM91 | GH43_19 | GH43_9
Gene ID: Rep_532_c_2_25
Type: TC
Location: 23599 - 24819 (-)
Gene ID: Rep_532_c_2_26
Type: TC
Location: 24839 - 25585 (-)
Gene ID: Rep_532_c_2_27
Type: pfam
Location: 25598 - 26821 (-)
Gene ID: Rep_532_c_2_28
Type: TC
Location: 26834 - 28177 (-)
Gene ID: Rep_532_c_2_29
Type: pfam
Location: 28320 - 28538 (+)
Gene ID: Rep_532_c_2_30
Type: TC
Location: 28577 - 30073 (+)
Gene ID: Rep_532_c_2_31
Type: pfam
Location: 30108 - 31259 (+)
Gene ID: Rep_532_c_2_32
Type: CAZyme
Location: 31557 - 34055 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List