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Cluster: Rep_532_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_532_c_35 Rep_532_c_35_12 16933 19500 - GT35
CAZyme Rep_532_c_35 Rep_532_c_35_13 19522 21192 - GT3
TC Rep_532_c_35 Rep_532_c_35_14 21433 21894 - 3.A.2.2.2
TC Rep_532_c_35 Rep_532_c_35_15 21933 23741 - 3.A.2.2.2
pfam Rep_532_c_35 Rep_532_c_35_16 23738 24343 - ATP-synt_D
TC Rep_532_c_35 Rep_532_c_35_17 24361 25680 - 3.A.2.3.3
TC Rep_532_c_35 Rep_532_c_35_18 25705 27462 - 3.A.2.3.3
Gene ID: Rep_532_c_35_12
Type: CAZyme
Location: 16933 - 19500 (-)
Gene ID: Rep_532_c_35_13
Type: CAZyme
Location: 19522 - 21192 (-)
Gene ID: Rep_532_c_35_14
Type: TC
Location: 21433 - 21894 (-)
Gene ID: Rep_532_c_35_15
Type: TC
Location: 21933 - 23741 (-)
Gene ID: Rep_532_c_35_16
Type: pfam
Location: 23738 - 24343 (-)
Gene ID: Rep_532_c_35_17
Type: TC
Location: 24361 - 25680 (-)
Gene ID: Rep_532_c_35_18
Type: TC
Location: 25705 - 27462 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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