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Cluster: Rep_532_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_532_c_21 Rep_532_c_21_1 2 1501 - GH2
CAZyme Rep_532_c_21 Rep_532_c_21_2 1691 3916 - GH92
CAZyme Rep_532_c_21 Rep_532_c_21_3 3943 6198 - GH92
CAZyme Rep_532_c_21 Rep_532_c_21_4 6247 8463 - GH92
pfam Rep_532_c_21 Rep_532_c_21_5 8830 9513 - Lipase_GDSL_2
CAZyme Rep_532_c_21 Rep_532_c_21_6 9510 11885 - GH115
pfam Rep_532_c_21 Rep_532_c_21_7 12235 13878 - SusD_RagB | SusD-like_3
TC Rep_532_c_21 Rep_532_c_21_8 13903 17043 - 1.B.14.6.1
CAZyme Rep_532_c_21 Rep_532_c_21_9 17350 20193 + GH3
Gene ID: Rep_532_c_21_1
Type: CAZyme
Location: 2 - 1501 (-)
Gene ID: Rep_532_c_21_2
Type: CAZyme
Location: 1691 - 3916 (-)
Gene ID: Rep_532_c_21_3
Type: CAZyme
Location: 3943 - 6198 (-)
Gene ID: Rep_532_c_21_4
Type: CAZyme
Location: 6247 - 8463 (-)
Gene ID: Rep_532_c_21_5
Type: pfam
Location: 8830 - 9513 (-)
Gene ID: Rep_532_c_21_6
Type: CAZyme
Location: 9510 - 11885 (-)
Gene ID: Rep_532_c_21_7
Type: pfam
Location: 12235 - 13878 (-)
Gene ID: Rep_532_c_21_8
Type: TC
Location: 13903 - 17043 (-)
Gene ID: Rep_532_c_21_9
Type: CAZyme
Location: 17350 - 20193 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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