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Cluster: Rep_532_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_532_c_0 Rep_532_c_0_109 120576 121463 - GH73
pfam Rep_532_c_0 Rep_532_c_0_110 121609 122091 + dCMP_cyt_deam_1 | dCMP_cyt_deam_2
TC Rep_532_c_0 Rep_532_c_0_111 122184 123803 - 3.A.1.121.4
TF Rep_532_c_0 Rep_532_c_0_112 123900 124658 - LytTR
TC Rep_532_c_0 Rep_532_c_0_113 124660 125703 - 8.A.59.2.1
pfam Rep_532_c_0 Rep_532_c_0_114 125713 126630 - HlyD_3 | HlyD_D23
TC Rep_532_c_0 Rep_532_c_0_115 126650 130990 - 2.A.6.1.5
TC Rep_532_c_0 Rep_532_c_0_116 131267 131884 + 3.A.8.1.1
Gene ID: Rep_532_c_0_109
Type: CAZyme
Location: 120576 - 121463 (-)
Gene ID: Rep_532_c_0_110
Type: pfam
Location: 121609 - 122091 (+)
Gene ID: Rep_532_c_0_111
Type: TC
Location: 122184 - 123803 (-)
Gene ID: Rep_532_c_0_112
Type: TF
Location: 123900 - 124658 (-)
Gene ID: Rep_532_c_0_113
Type: TC
Location: 124660 - 125703 (-)
Gene ID: Rep_532_c_0_114
Type: pfam
Location: 125713 - 126630 (-)
Gene ID: Rep_532_c_0_115
Type: TC
Location: 126650 - 130990 (-)
Gene ID: Rep_532_c_0_116
Type: TC
Location: 131267 - 131884 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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