Cluster: Rep_532_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_532
- CGC Family ID: CGCFAM_01220
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_532_c_18 | Rep_532_c_18_35 | 42422 | 43138 | + | 9.B.186.1.3 |
| CAZyme | Rep_532_c_18 | Rep_532_c_18_36 | 43225 | 43920 | + | GT51 |
| TC | Rep_532_c_18 | Rep_532_c_18_37 | 43925 | 44563 | - | 1.A.62.2.1 |
| TC | Rep_532_c_18 | Rep_532_c_18_38 | 44574 | 46031 | - | 9.B.168.1.2 |
| CAZyme | Rep_532_c_18 | Rep_532_c_18_39 | 46258 | 48174 | - | PL33_1 |
Gene ID: Rep_532_c_18_35
Type: TC
Location: 42422 - 43138 (+)
Type: TC
Location: 42422 - 43138 (+)
Gene ID: Rep_532_c_18_36
Type: CAZyme
Location: 43225 - 43920 (+)
Type: CAZyme
Location: 43225 - 43920 (+)
Gene ID: Rep_532_c_18_37
Type: TC
Location: 43925 - 44563 (-)
Type: TC
Location: 43925 - 44563 (-)
Gene ID: Rep_532_c_18_38
Type: TC
Location: 44574 - 46031 (-)
Type: TC
Location: 44574 - 46031 (-)
Gene ID: Rep_532_c_18_39
Type: CAZyme
Location: 46258 - 48174 (-)
Type: CAZyme
Location: 46258 - 48174 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900551445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.