dbCAN Logo

Cluster: Rep_532_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_532_c_15 Rep_532_c_15_13 14736 16589 + GH13_46
CAZyme Rep_532_c_15 Rep_532_c_15_14 16766 18946 + GH97
TC Rep_532_c_15 Rep_532_c_15_15 19023 22040 + 1.B.14.6.1
TC Rep_532_c_15 Rep_532_c_15_16 22062 23729 + 8.A.46.1.1
pfam Rep_532_c_15 Rep_532_c_15_17 23749 24912 + SusE | SusF_SusE
TC Rep_532_c_15 Rep_532_c_15_18 25016 25834 - 1.B.42.1.2
TC Rep_532_c_15 Rep_532_c_15_19 25974 26717 + 3.A.1.27.2
TC Rep_532_c_15 Rep_532_c_15_20 26714 27487 + 3.A.1.27.4
Gene ID: Rep_532_c_15_13
Type: CAZyme
Location: 14736 - 16589 (+)
Gene ID: Rep_532_c_15_14
Type: CAZyme
Location: 16766 - 18946 (+)
Gene ID: Rep_532_c_15_15
Type: TC
Location: 19023 - 22040 (+)
Gene ID: Rep_532_c_15_16
Type: TC
Location: 22062 - 23729 (+)
Gene ID: Rep_532_c_15_17
Type: pfam
Location: 23749 - 24912 (+)
Gene ID: Rep_532_c_15_18
Type: TC
Location: 25016 - 25834 (-)
Gene ID: Rep_532_c_15_19
Type: TC
Location: 25974 - 26717 (+)
Gene ID: Rep_532_c_15_20
Type: TC
Location: 26714 - 27487 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List