dbCAN Logo

Cluster: Rep_532_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_532_c_5 Rep_532_c_5_39 48733 51081 + GH35
TF Rep_532_c_5 Rep_532_c_5_40 51083 55111 - HTH_AraC | HTH_AraC
TC Rep_532_c_5 Rep_532_c_5_41 55475 58666 + 1.B.14.6.2
TC Rep_532_c_5 Rep_532_c_5_42 58728 60371 + 8.A.46.2.2
NULL(UNKNOWN) Rep_532_c_5 Rep_532_c_5_43 60396 61649 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_532_c_5 Rep_532_c_5_44 61721 63289 + GH5_4
CAZyme Rep_532_c_5 Rep_532_c_5_45 63301 66570 + GH3 | GH5_38
CAZyme Rep_532_c_5 Rep_532_c_5_46 66613 68982 + GH3
Gene ID: Rep_532_c_5_39
Type: CAZyme
Location: 48733 - 51081 (+)
Gene ID: Rep_532_c_5_40
Type: TF
Location: 51083 - 55111 (-)
Gene ID: Rep_532_c_5_41
Type: TC
Location: 55475 - 58666 (+)
Gene ID: Rep_532_c_5_42
Type: TC
Location: 58728 - 60371 (+)
Gene ID: Rep_532_c_5_43
Type:
Location: 60396 - 61649 (+)
Gene ID: Rep_532_c_5_44
Type: CAZyme
Location: 61721 - 63289 (+)
Gene ID: Rep_532_c_5_45
Type: CAZyme
Location: 63301 - 66570 (+)
Gene ID: Rep_532_c_5_46
Type: CAZyme
Location: 66613 - 68982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List