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Cluster: Rep_532_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_532_c_5 Rep_532_c_5_23 29408 31831 - 1.B.14.3.1
pfam Rep_532_c_5 Rep_532_c_5_24 32006 32788 - S6PP | Hydrolase_3
pfam Rep_532_c_5 Rep_532_c_5_25 33236 34327 + AA_kinase | PUA
CAZyme Rep_532_c_5 Rep_532_c_5_26 34341 35477 - GH109
NULL(UNKNOWN) Rep_532_c_5 Rep_532_c_5_27 35509 35898 - NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_532_c_5 Rep_532_c_5_28 35992 36546 + HTH_3
TC Rep_532_c_5 Rep_532_c_5_29 36568 38223 + 2.A.1.42.2
CAZyme Rep_532_c_5 Rep_532_c_5_30 38262 41348 + PL8_2
pfam Rep_532_c_5 Rep_532_c_5_31 41445 42332 - NAD_kinase | NAD_kinase_C
pfam Rep_532_c_5 Rep_532_c_5_32 42530 43243 + PdxJ
TC Rep_532_c_5 Rep_532_c_5_33 43247 43966 + 1.A.30.2.9
Gene ID: Rep_532_c_5_23
Type: TC
Location: 29408 - 31831 (-)
Gene ID: Rep_532_c_5_24
Type: pfam
Location: 32006 - 32788 (-)
Gene ID: Rep_532_c_5_25
Type: pfam
Location: 33236 - 34327 (+)
Gene ID: Rep_532_c_5_26
Type: CAZyme
Location: 34341 - 35477 (-)
Gene ID: Rep_532_c_5_27
Type:
Location: 35509 - 35898 (-)
Gene ID: Rep_532_c_5_28
Type: TF
Location: 35992 - 36546 (+)
Gene ID: Rep_532_c_5_29
Type: TC
Location: 36568 - 38223 (+)
Gene ID: Rep_532_c_5_30
Type: CAZyme
Location: 38262 - 41348 (+)
Gene ID: Rep_532_c_5_31
Type: pfam
Location: 41445 - 42332 (-)
Gene ID: Rep_532_c_5_32
Type: pfam
Location: 42530 - 43243 (+)
Gene ID: Rep_532_c_5_33
Type: TC
Location: 43247 - 43966 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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