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Cluster: Rep_529_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_529_c_0 Rep_529_c_0_68 85074 87434 - GH35
CAZyme Rep_529_c_0 Rep_529_c_0_69 87528 90014 - GH51_2
CAZyme Rep_529_c_0 Rep_529_c_0_70 90039 91961 - GH43_19 | GH43_34
TC Rep_529_c_0 Rep_529_c_0_71 92163 93128 + 2.A.19.5.2
NULL(UNKNOWN) Rep_529_c_0 Rep_529_c_0_72 93150 93524 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_529_c_0 Rep_529_c_0_73 93620 95650 - GH182
CAZyme Rep_529_c_0 Rep_529_c_0_74 95655 96632 - GH43_3
TF Rep_529_c_0 Rep_529_c_0_75 96772 100767 - HTH_AraC | HTH_AraC
CAZyme Rep_529_c_0 Rep_529_c_0_76 100785 102602 - GH2
pfam Rep_529_c_0 Rep_529_c_0_77 103014 103916 - DUF2807 | DUF2807 | DUF4097
pfam Rep_529_c_0 Rep_529_c_0_78 103955 106330 - FtsX | FtsX | MacB_PCD
TC Rep_529_c_0 Rep_529_c_0_79 106343 107020 - 3.A.1.122.2
Gene ID: Rep_529_c_0_68
Type: CAZyme
Location: 85074 - 87434 (-)
Gene ID: Rep_529_c_0_69
Type: CAZyme
Location: 87528 - 90014 (-)
Gene ID: Rep_529_c_0_70
Type: CAZyme
Location: 90039 - 91961 (-)
Gene ID: Rep_529_c_0_71
Type: TC
Location: 92163 - 93128 (+)
Gene ID: Rep_529_c_0_72
Type:
Location: 93150 - 93524 (+)
Gene ID: Rep_529_c_0_73
Type: CAZyme
Location: 93620 - 95650 (-)
Gene ID: Rep_529_c_0_74
Type: CAZyme
Location: 95655 - 96632 (-)
Gene ID: Rep_529_c_0_75
Type: TF
Location: 96772 - 100767 (-)
Gene ID: Rep_529_c_0_76
Type: CAZyme
Location: 100785 - 102602 (-)
Gene ID: Rep_529_c_0_77
Type: pfam
Location: 103014 - 103916 (-)
Gene ID: Rep_529_c_0_78
Type: pfam
Location: 103955 - 106330 (-)
Gene ID: Rep_529_c_0_79
Type: TC
Location: 106343 - 107020 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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