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Cluster: Rep_529_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_529_c_24 Rep_529_c_24_20 21460 23958 - CBM91 | GH43_19 | GH43_9
pfam Rep_529_c_24 Rep_529_c_24_21 24257 25408 - Cyt_bd_oxida_II
TC Rep_529_c_24 Rep_529_c_24_22 25443 26939 - 3.D.4.3.2
pfam Rep_529_c_24 Rep_529_c_24_23 26978 27196 - DUF4492
TC Rep_529_c_24 Rep_529_c_24_24 27339 28682 + 3.A.1.109.5
pfam Rep_529_c_24 Rep_529_c_24_25 28695 29915 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC Rep_529_c_24 Rep_529_c_24_26 29928 30674 + 3.A.1.122.2
TC Rep_529_c_24 Rep_529_c_24_27 30694 31914 + 3.A.1.122.1
Gene ID: Rep_529_c_24_20
Type: CAZyme
Location: 21460 - 23958 (-)
Gene ID: Rep_529_c_24_21
Type: pfam
Location: 24257 - 25408 (-)
Gene ID: Rep_529_c_24_22
Type: TC
Location: 25443 - 26939 (-)
Gene ID: Rep_529_c_24_23
Type: pfam
Location: 26978 - 27196 (-)
Gene ID: Rep_529_c_24_24
Type: TC
Location: 27339 - 28682 (+)
Gene ID: Rep_529_c_24_25
Type: pfam
Location: 28695 - 29915 (+)
Gene ID: Rep_529_c_24_26
Type: TC
Location: 29928 - 30674 (+)
Gene ID: Rep_529_c_24_27
Type: TC
Location: 30694 - 31914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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