dbCAN Logo

Cluster: Rep_529_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_529_c_15 Rep_529_c_15_30 38286 39362 + GT4
CAZyme Rep_529_c_15 Rep_529_c_15_31 39390 40652 + GT4
CAZyme Rep_529_c_15 Rep_529_c_15_32 40645 41418 + GT2
TC Rep_529_c_15 Rep_529_c_15_33 41463 43955 - 9.B.144.1.4
pfam Rep_529_c_15 Rep_529_c_15_34 44046 44741 + PNP_UDP_1
pfam Rep_529_c_15 Rep_529_c_15_35 44748 45233 + LuxS
CAZyme Rep_529_c_15 Rep_529_c_15_36 45426 47840 - GH2
CAZyme Rep_529_c_15 Rep_529_c_15_37 47858 49462 - GH30_4
TC Rep_529_c_15 Rep_529_c_15_38 49548 51245 - 8.A.46.1.3
TC Rep_529_c_15 Rep_529_c_15_39 51259 54264 - 1.B.14.6.1
Gene ID: Rep_529_c_15_30
Type: CAZyme
Location: 38286 - 39362 (+)
Gene ID: Rep_529_c_15_31
Type: CAZyme
Location: 39390 - 40652 (+)
Gene ID: Rep_529_c_15_32
Type: CAZyme
Location: 40645 - 41418 (+)
Gene ID: Rep_529_c_15_33
Type: TC
Location: 41463 - 43955 (-)
Gene ID: Rep_529_c_15_34
Type: pfam
Location: 44046 - 44741 (+)
Gene ID: Rep_529_c_15_35
Type: pfam
Location: 44748 - 45233 (+)
Gene ID: Rep_529_c_15_36
Type: CAZyme
Location: 45426 - 47840 (-)
Gene ID: Rep_529_c_15_37
Type: CAZyme
Location: 47858 - 49462 (-)
Gene ID: Rep_529_c_15_38
Type: TC
Location: 49548 - 51245 (-)
Gene ID: Rep_529_c_15_39
Type: TC
Location: 51259 - 54264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List