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Cluster: Rep_529_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_529_c_7 Rep_529_c_7_58 77309 79009 + GH13_38
TC Rep_529_c_7 Rep_529_c_7_59 79133 80791 + 4.C.1.1.4
NULL(UNKNOWN) Rep_529_c_7 Rep_529_c_7_60 80797 82044 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_529_c_7 Rep_529_c_7_61 82071 82655 - cNMP_binding
TC Rep_529_c_7 Rep_529_c_7_62 82681 83568 - 2.A.115.1.1
STP Rep_529_c_7 Rep_529_c_7_63 83722 84951 + Aminotran_1_2
pfam Rep_529_c_7 Rep_529_c_7_64 85040 87229 + Gln-synt_C | GSIII_N | Gln-synt_C-ter
TC Rep_529_c_7 Rep_529_c_7_65 87389 89050 + 2.A.81.1.2
Gene ID: Rep_529_c_7_58
Type: CAZyme
Location: 77309 - 79009 (+)
Gene ID: Rep_529_c_7_59
Type: TC
Location: 79133 - 80791 (+)
Gene ID: Rep_529_c_7_60
Type:
Location: 80797 - 82044 (+)
Gene ID: Rep_529_c_7_61
Type: STP
Location: 82071 - 82655 (-)
Gene ID: Rep_529_c_7_62
Type: TC
Location: 82681 - 83568 (-)
Gene ID: Rep_529_c_7_63
Type: STP
Location: 83722 - 84951 (+)
Gene ID: Rep_529_c_7_64
Type: pfam
Location: 85040 - 87229 (+)
Gene ID: Rep_529_c_7_65
Type: TC
Location: 87389 - 89050 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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