dbCAN Logo

Cluster: Rep_529_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_529_c_6 Rep_529_c_6_45 67984 68757 - 3.A.1.27.4
TC Rep_529_c_6 Rep_529_c_6_46 68754 69497 - 3.A.1.27.2
TC Rep_529_c_6 Rep_529_c_6_47 69637 70455 + 1.B.42.1.2
pfam Rep_529_c_6 Rep_529_c_6_48 70556 71719 - SusE | SusF_SusE
TC Rep_529_c_6 Rep_529_c_6_49 71739 73406 - 8.A.46.1.1
TC Rep_529_c_6 Rep_529_c_6_50 73428 76445 - 1.B.14.6.1
CAZyme Rep_529_c_6 Rep_529_c_6_51 76522 78702 - GH97
CAZyme Rep_529_c_6 Rep_529_c_6_52 78879 80732 - GH13_46
Gene ID: Rep_529_c_6_45
Type: TC
Location: 67984 - 68757 (-)
Gene ID: Rep_529_c_6_46
Type: TC
Location: 68754 - 69497 (-)
Gene ID: Rep_529_c_6_47
Type: TC
Location: 69637 - 70455 (+)
Gene ID: Rep_529_c_6_48
Type: pfam
Location: 70556 - 71719 (-)
Gene ID: Rep_529_c_6_49
Type: TC
Location: 71739 - 73406 (-)
Gene ID: Rep_529_c_6_50
Type: TC
Location: 73428 - 76445 (-)
Gene ID: Rep_529_c_6_51
Type: CAZyme
Location: 76522 - 78702 (-)
Gene ID: Rep_529_c_6_52
Type: CAZyme
Location: 78879 - 80732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List