Cluster: Rep_527_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_580 | 688657 | 689403 | - | GT2 |
| pfam | Rep_527_c_0 | Rep_527_c_0_581 | 689791 | 690093 | + | Acetyltransf_CG |
| TC | Rep_527_c_0 | Rep_527_c_0_582 | 690118 | 692289 | - | 2.A.36.7.6 |
Gene ID: Rep_527_c_0_580
Type: CAZyme
Location: 688657 - 689403 (-)
Type: CAZyme
Location: 688657 - 689403 (-)
Gene ID: Rep_527_c_0_581
Type: pfam
Location: 689791 - 690093 (+)
Type: pfam
Location: 689791 - 690093 (+)
Gene ID: Rep_527_c_0_582
Type: TC
Location: 690118 - 692289 (-)
Type: TC
Location: 690118 - 692289 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.