Cluster: Rep_527_CGC63
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_527
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_527_c_0 | Rep_527_c_0_3405 | 4038385 | 4039356 | + | GH130_2 |
| CAZyme | Rep_527_c_0 | Rep_527_c_0_3406 | 4039426 | 4041654 | + | GH92 |
| TC | Rep_527_c_0 | Rep_527_c_0_3407 | 4041660 | 4042475 | - | 2.A.64.3.2 |
Gene ID: Rep_527_c_0_3405
Type: CAZyme
Location: 4038385 - 4039356 (+)
Type: CAZyme
Location: 4038385 - 4039356 (+)
Gene ID: Rep_527_c_0_3406
Type: CAZyme
Location: 4039426 - 4041654 (+)
Type: CAZyme
Location: 4039426 - 4041654 (+)
Gene ID: Rep_527_c_0_3407
Type: TC
Location: 4041660 - 4042475 (-)
Type: TC
Location: 4041660 - 4042475 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola plebeius_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.