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Cluster: Rep_527_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_527_c_0 Rep_527_c_0_3334 3946908 3950159 - 1.B.14.6.1
NULL(UNKNOWN) Rep_527_c_0 Rep_527_c_0_3335 3950309 3950440 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_527_c_0 Rep_527_c_0_3336 3950479 3952383 + PL33_1
CAZyme Rep_527_c_0 Rep_527_c_0_3337 3952410 3953654 + GH88
CAZyme Rep_527_c_0 Rep_527_c_0_3338 3953661 3954896 + GH154
NULL(UNKNOWN) Rep_527_c_0 Rep_527_c_0_3339 3955692 3955784 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_527_c_0 Rep_527_c_0_3340 3961392 3962561 - CE9
CAZyme Rep_527_c_0 Rep_527_c_0_3341 3962583 3963749 - CE9
Gene ID: Rep_527_c_0_3334
Type: TC
Location: 3946908 - 3950159 (-)
Gene ID: Rep_527_c_0_3335
Type:
Location: 3950309 - 3950440 (+)
Gene ID: Rep_527_c_0_3336
Type: CAZyme
Location: 3950479 - 3952383 (+)
Gene ID: Rep_527_c_0_3337
Type: CAZyme
Location: 3952410 - 3953654 (+)
Gene ID: Rep_527_c_0_3338
Type: CAZyme
Location: 3953661 - 3954896 (+)
Gene ID: Rep_527_c_0_3339
Type:
Location: 3955692 - 3955784 (+)
Gene ID: Rep_527_c_0_3340
Type: CAZyme
Location: 3961392 - 3962561 (-)
Gene ID: Rep_527_c_0_3341
Type: CAZyme
Location: 3962583 - 3963749 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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